Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OR7E157P-201ENST00000494376 911 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC034244.1-201ENST00000507687 207 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC006499.4-201ENST00000510947 694 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC087373.1-201ENST00000524920 491 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC092332.1-201ENST00000563684 829 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 MIR4472-2-201ENST00000582069 67 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL139099.4-201ENST00000614802 114 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC009318.3-201ENST00000616916 503 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 MTND4P10-201ENST00000446199 1363 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL354854.1-201ENST00000455940 1363 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 CASC19-248ENST00000641674 1356 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC116158.1-201ENST00000560231 2129 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 VN2R3P-201ENST00000422626 1412 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 RNA5SP510-201ENST00000364697 99 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 RN7SKP78-201ENST00000364711 318 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 RNU4-7P-201ENST00000364758 141 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 SNORD116-1-201ENST00000384335 95 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 MIR130B-202ENST00000385018 82 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 FCF1P5-201ENST00000406490 482 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 FTLP19-201ENST00000433300 394 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 NANOGP2-201ENST00000435391 727 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC023141.3-201ENST00000436698 278 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL353662.1-201ENST00000439099 327 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 BMS1P10-201ENST00000443754 1120 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC012512.1-201ENST00000446594 718 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 RPS23P9-201ENST00000448848 438 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 ATG12P2-201ENST00000456830 416 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 PSMC1P13-201ENST00000458195 985 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 RPS3AP22-201ENST00000488297 769 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 LSM3P4-201ENST00000502948 309 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 HMGB1P1-201ENST00000522557 636 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 MTCO1P47-201ENST00000523889 1271 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC068305.2-201ENST00000550567 1205 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC124856.1-201ENST00000600819 896 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms