Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 APOOP2-201ENST00000461561 539 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RN7SL558P-201ENST00000497468 299 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RPS4XP20-201ENST00000505751 772 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 UGT2A3P7-201ENST00000510485 734 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RN7SKP34-201ENST00000516142 244 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 KCTD9P6-201ENST00000522306 950 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC025946.2-201ENST00000603398 234 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 FO393422.1-201ENST00000603908 708 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC067852.7-201ENST00000623270 535 ntBASIC3.62□□□□□ -1.83
AP1S3Q96PC3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S3Q96PC3 AC009643.2-201ENST00000603543 1448 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 MIR365B-201ENST00000362317 111 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 SNORA70.10-201ENST00000384515 134 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 RNU1-77P-201ENST00000390868 162 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AL021331.1-201ENST00000402817 582 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 VDAC1P9-201ENST00000412766 841 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 QRSL1P2-201ENST00000418582 964 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 EI24P4-201ENST00000423683 1078 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 EIF4HP2-201ENST00000424380 563 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AL357520.1-201ENST00000441557 453 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC064862.4-201ENST00000442180 334 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 RN7SL799P-201ENST00000475891 298 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 SIAH1P1-201ENST00000479411 923 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 SULT1C2P2-201ENST00000562517 294 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 MIR4271-201ENST00000582451 67 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC104687.2-201ENST00000604442 342 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC090948.2-201ENST00000607363 564 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 RPSAP73-201ENST00000614820 330 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AL049794.2-201ENST00000616301 365 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 AC004232.3-201ENST00000622977 525 ntBASIC3.61□□□□□ -1.83
AP1S3Q96PC3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S3Q96PC3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC011155.1-201ENST00000316512 456 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 RN7SKP124-201ENST00000364730 341 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 RN7SKP187-201ENST00000365536 330 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AL512422.1-201ENST00000407033 553 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 U3.35-201ENST00000408405 208 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 GABARAPL3-201ENST00000412799 354 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 CDY17P-201ENST00000414121 1282 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC009302.1-201ENST00000417147 390 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 NANOGP6-201ENST00000429190 847 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms