Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RPL23AP37-201ENST00000479658 549 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 AC090686.1-201ENST00000481577 749 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 RPSAP50-201ENST00000481955 852 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 AC008953.1-201ENST00000497334 318 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 AC147055.3-201ENST00000510547 851 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 HMGN2P6-201ENST00000551091 273 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 AC012414.7-202ENST00000622705 1090 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 CASC19-206ENST00000641028 1430 ntBASIC3.84□□□□□ -1.79
TTC9CQ8N5M4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TTC9CQ8N5M4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.84□□□□□ -1.8
TTC9CQ8N5M4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.84□□□□□ -1.8
TTC9CQ8N5M4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TTC9CQ8N5M4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TTC9CQ8N5M4 AC099654.2-201ENST00000433031 1980 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RNA5SP507-201ENST00000363603 121 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 GTF2IP5-201ENST00000414608 731 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RPL23AP27-201ENST00000415161 451 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ATG4AP1-201ENST00000416893 538 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 NMNAT1P2-201ENST00000435192 860 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AL627308.1-201ENST00000435693 821 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RPL7P11-201ENST00000437586 658 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 PRPF38AP2-201ENST00000438179 851 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AL136455.1-201ENST00000441083 1240 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 PTMAP3-201ENST00000447474 330 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC020890.1-201ENST00000491837 504 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RPL37AP8-201ENST00000494116 276 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RN7SL558P-201ENST00000497468 299 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 MRPS33P2-201ENST00000507850 322 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RNU6-709P-201ENST00000517257 104 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC087468.1-201ENST00000604365 630 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AL121932.1-201ENST00000605542 214 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 SNORD91B-202ENST00000608459 222 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC009704.2-201ENST00000618739 483 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC091905.4-201ENST00000623432 202 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC112694.2-201ENST00000623697 768 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 RARSP1-201ENST00000542842 1418 ntBASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TTC9CQ8N5M4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC092435.4-201ENST00000623012 4159 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC091046.3-201ENST00000631455 1574 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC008549.2-201ENST00000333482 706 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 RNA5SP28-201ENST00000363841 119 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 HMGB3P7-201ENST00000400214 611 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MIR1178-201ENST00000408396 91 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 RPL12P43-201ENST00000420608 499 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 BX510359.3-201ENST00000422168 306 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms