Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 GUCY1B2-204ENST00000531898 1979 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC119674.1-202ENST00000641333 1860 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 LINC01963-201ENST00000562038 3148 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL391994.1-201ENST00000254724 282 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 RNA5SP478-201ENST00000364657 115 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL050335.1-201ENST00000396909 869 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 RPS3AP2-201ENST00000407190 754 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL096829.1-201ENST00000413677 457 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC010975.2-201ENST00000427781 588 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL590103.1-201ENST00000434488 307 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 SUMO2P3-201ENST00000438311 288 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 MTND3P1-201ENST00000441336 220 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL592437.1-201ENST00000443781 492 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 USP9YP29-201ENST00000445112 563 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC023271.1-201ENST00000445936 1090 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 EEF1E1P1-201ENST00000446998 430 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL118496.2-201ENST00000448300 230 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL445466.1-201ENST00000448432 357 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 MTND5P20-201ENST00000448677 143 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL122020.1-201ENST00000472287 459 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 EIF3LP3-201ENST00000495197 822 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC074344.1-201ENST00000512823 224 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 IGKV2-18-201ENST00000522607 343 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 OR8Q1P-201ENST00000526467 655 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AP000648.1-201ENST00000529682 397 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 PCNAP4-201ENST00000532690 730 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 CENPUP2-201ENST00000555897 1186 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 ANP32BP3-201ENST00000559213 706 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC020765.1-201ENST00000604296 328 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC015922.4-201ENST00000612568 690 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC072046.2-201ENST00000618366 268 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AL356321.1-201ENST00000621360 228 ntBASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEFF1Q8IYR6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.09□□□□□ -1.44
TMEFF1Q8IYR6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.09□□□□□ -1.44
TMEFF1Q8IYR6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
TMEFF1Q8IYR6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 OR56B2P-201ENST00000317102 954 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 RNU4-21P-201ENST00000362802 126 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 Y_RNA.192-201ENST00000363977 102 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 SNORA43.1-201ENST00000364863 140 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 Y_RNA.408-201ENST00000383987 102 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 RNU6-1042P-201ENST00000384204 107 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 MTND1P14-201ENST00000427400 950 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 AC104651.1-201ENST00000427559 735 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 MED14P1-201ENST00000430517 648 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 CDY14P-201ENST00000431260 1014 ntBASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.08□□□□□ -1.44
TMEFF1Q8IYR6 CDY23P-201ENST00000451661 1014 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms