Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 MT-RNR1-201ENST00000389680 954 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AL390879.1-201ENST00000439143 386 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 DHFRP3-201ENST00000455595 559 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC107982.3-201ENST00000584957 985 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC104763.2-201ENST00000604179 382 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 MIR6867-201ENST00000610636 67 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 U3.53-201ENST00000628922 216 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC135352.1-201ENST00000506173 1418 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AP001157.1-201ENST00000550837 2339 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 MIR383-201ENST00000362257 73 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 RNA5SP126-201ENST00000365092 109 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 RPS27AP13-201ENST00000498403 237 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 RNU1-6P-201ENST00000516290 144 ntBASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFHX4Q86UP3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 SNORA5A-201ENST00000384111 134 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AC116562.1-201ENST00000485355 781 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 GTF2IP8-201ENST00000560687 584 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AP000756.2-201ENST00000624168 2567 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AC006116.5-201ENST00000591936 559 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 AL683813.2-201ENST00000605245 502 ntBASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFHX4Q86UP3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 AC025518.1-201ENST00000479856 347 ntBASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 AP000827.1-201ENST00000527814 258 ntBASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZFHX4Q86UP3 LINC00993-201ENST00000420453 540 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms