Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL450992.3-201ENST00000413192 568 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 RPS3AP12-201ENST00000443616 753 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 RPS7P7-201ENST00000463499 571 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 AC087477.6-201ENST00000559595 843 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 MIR554-201ENST00000384874 96 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 BOLA3P4-201ENST00000418151 400 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 AL445584.1-201ENST00000431451 330 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 RPS27AP13-201ENST00000498403 237 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 BPIFA4P-203ENST00000603168 689 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 AL160281.1-201ENST00000605307 311 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 OR9K1P-202ENST00000641111 3217 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 AL158827.1-201ENST00000416300 391 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 MTCO1P54-201ENST00000430139 712 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 BTF3P10-201ENST00000433415 495 ntBASIC3.68□□□□□ -1.82
VPS13CQ709C8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
VPS13CQ709C8 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS13CQ709C8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 RPL21P67-201ENST00000402896 478 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 COX6CP13-201ENST00000428703 226 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 HMGN2P31-201ENST00000432430 273 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 PSAT1P4-201ENST00000466500 526 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC025164.1-201ENST00000496249 478 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AP005205.1-201ENST00000563503 508 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC022146.1-201ENST00000595307 847 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC020978.9-201ENST00000624380 1141 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 NDUFA5P1-201ENST00000433858 341 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 VN1R105P-201ENST00000486595 910 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 KCTD9P2-201ENST00000512203 1013 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC007998.4-201ENST00000612496 2533 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 MIR483-201ENST00000385070 76 ntBASIC3.67□□□□□ -1.82
VPS13CQ709C8 ERG-202ENST00000398897 4651 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS13CQ709C8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms