Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 SS18L2P2-201ENST00000583960 235 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC009027.1-201ENST00000604510 479 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AL162431.4-201ENST00000604674 411 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC025175.1-201ENST00000606482 759 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC084824.5-201ENST00000612009 413 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC027228.2-201ENST00000567141 2154 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RNU1-106P-201ENST00000384382 164 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 MIR105-1-201ENST00000385222 81 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 SNORA11B-201ENST00000408175 129 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC211486.3-201ENST00000412694 621 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RPS4XP16-201ENST00000427198 791 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 MTND2P2-201ENST00000434633 945 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC012512.1-201ENST00000446594 718 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RPSAP50-201ENST00000481955 852 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC004453.1-201ENST00000487895 408 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RPL32P9-201ENST00000487963 407 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC109462.1-201ENST00000491087 368 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 GTF2F2P1-201ENST00000511083 675 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC021193.1-201ENST00000511607 420 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 RPS27AP18-201ENST00000515536 459 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC025918.2-201ENST00000558683 763 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC093510.2-201ENST00000562820 896 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC099494.2-201ENST00000623371 978 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AP006248.3-201ENST00000623580 594 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 HSPA8P17-201ENST00000427029 1382 ntBASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX30Q5VWJ9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 HSPA8P18-201ENST00000439846 1928 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC007996.1-201ENST00000620414 2821 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 MIR320B1-201ENST00000390209 79 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 MIR1182-201ENST00000408363 97 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 RNU2-17P-201ENST00000410290 190 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms