Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PTENP1-201ENST00000447117 1215 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 MYO5BP2-201ENST00000449815 1277 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 TPMTP4-201ENST00000450749 678 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 RPL23AP71-201ENST00000470966 469 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC034244.1-201ENST00000507687 207 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC092593.2-201ENST00000513866 913 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 snoU109.6-201ENST00000516831 118 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC023632.1-201ENST00000518463 375 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 IGKV2-36-201ENST00000519999 223 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 TPM3P3-201ENST00000521343 354 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 NIFKP8-201ENST00000560500 874 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC023813.2-201ENST00000564321 469 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 MIR5708-201ENST00000579723 85 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 MIR4666A-201ENST00000580160 79 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 MIR4505-201ENST00000582238 73 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 OR7E18P-201ENST00000592589 702 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 FO393422.1-201ENST00000603908 708 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AL162574.1-201ENST00000615702 950 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 NLRP3P1-201ENST00000622303 1785 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 SNORA64.1-201ENST00000362600 132 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 RNA5SP394-201ENST00000364216 119 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC114814.2-201ENST00000419195 485 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 FHP1-201ENST00000442741 703 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 RPS26P30-201ENST00000443431 335 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 MTCYBP11-201ENST00000447254 1109 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 MRPL35P4-201ENST00000453682 566 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 RN7SL466P-201ENST00000497546 295 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 NENFP3-201ENST00000503735 313 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 HMGB1P23-201ENST00000518743 568 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 HMGN2P36-201ENST00000529541 409 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC018552.1-201ENST00000562099 811 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC009712.1-201ENST00000564938 316 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC015688.2-201ENST00000584523 262 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AP001269.3-201ENST00000588718 329 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 PCNAP1-202ENST00000595299 752 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC068790.7-201ENST00000602347 528 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC002069.2-201ENST00000603580 883 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 DUXAP3-201ENST00000603616 594 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC023813.4-201ENST00000607580 580 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC097065.2-201ENST00000608159 533 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 AL691477.1-201ENST00000624398 162 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 MFSD8-245ENST00000641743 948 ntBASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC144BQ3MJ40 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 RNA5SP46-201ENST00000362370 120 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms