Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC091544.1-201ENST00000484702 348 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 HMGB1P29-201ENST00000505659 499 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 RNU6-1170P-201ENST00000515974 106 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 Y_RNA.720-201ENST00000517166 92 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AC008429.2-201ENST00000523057 864 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AP000662.1-201ENST00000530952 487 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 RPL3P13-201ENST00000550415 216 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 HIF1AP1-201ENST00000553642 175 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 CYP2C60P-201ENST00000566088 139 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 MIR1273E-201ENST00000581165 102 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AC183089.2-201ENST00000637931 916 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 LPAL2-203ENST00000454031 2498 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 AL096816.1-201ENST00000623300 2920 ntBASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO4Q2I0M5 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC068860.1-201ENST00000623701 3736 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AL451064.2-201ENST00000623514 1654 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 ABCA11P-202ENST00000504019 2110 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 RNU6-549P-201ENST00000384433 107 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 SNORA68-201ENST00000384437 133 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 RAC1P4-201ENST00000419413 579 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 SNRPEP10-201ENST00000420249 274 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 OSTCP4-201ENST00000424397 449 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 RPL7P56-201ENST00000429441 717 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 OR51P1P-201ENST00000447547 942 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 SNRPFP4-201ENST00000456366 242 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC023141.9-201ENST00000458734 412 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 Y_RNA.639-201ENST00000458981 102 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC023194.2-201ENST00000465398 406 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AP000797.1-201ENST00000478870 387 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 CCDC11P1-201ENST00000503137 1162 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC093809.1-201ENST00000509155 340 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AL390198.2-201ENST00000510553 222 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 RNU6-1271P-201ENST00000517049 105 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 PAICSP4-201ENST00000517543 1253 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 IGLV2-28-201ENST00000520681 304 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 OR5AP1P-201ENST00000529730 940 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC018638.8-201ENST00000588755 281 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC092266.1-201ENST00000610958 165 ntBASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO4Q2I0M5 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms