Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
LIMK2P53671 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK2P53671 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK2P53671 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK2P53671 NXF4-202ENST00000416098 1465 ntBASIC5□□□□□ -1.61
LIMK2P53671 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 SCARNA15-201ENST00000607520 4325 ntBASIC5□□□□□ -1.61
LIMK2P53671 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 ATP5HP3-201ENST00000396994 486 ntBASIC5□□□□□ -1.61
LIMK2P53671 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 RN7SKP216-201ENST00000411050 312 ntBASIC5□□□□□ -1.61
LIMK2P53671 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 QRSL1P2-201ENST00000418582 964 ntBASIC5□□□□□ -1.61
LIMK2P53671 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 HSPE1P16-201ENST00000426640 348 ntBASIC5□□□□□ -1.61
LIMK2P53671 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 Z80107.2-201ENST00000445127 392 ntBASIC5□□□□□ -1.61
LIMK2P53671 KNOP1P3-201ENST00000446933 426 ntBASIC5□□□□□ -1.61
LIMK2P53671 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5□□□□□ -1.61
LIMK2P53671 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 RPL31P44-201ENST00000447680 377 ntBASIC5□□□□□ -1.61
LIMK2P53671 TRY2P-201ENST00000448860 689 ntBASIC5□□□□□ -1.61
LIMK2P53671 NDUFA5P8-201ENST00000449019 346 ntBASIC5□□□□□ -1.61
LIMK2P53671 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 MTND6P32-201ENST00000457611 483 ntBASIC5□□□□□ -1.61
LIMK2P53671 snoU13.20-201ENST00000459180 104 ntBASIC5□□□□□ -1.61
LIMK2P53671 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5□□□□□ -1.61
LIMK2P53671 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 AC083982.1-201ENST00000485679 344 ntBASIC5□□□□□ -1.61
LIMK2P53671 RPL37AP8-201ENST00000494116 276 ntBASIC5□□□□□ -1.61
LIMK2P53671 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5□□□□□ -1.61
LIMK2P53671 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 RNU6-319P-201ENST00000516025 108 ntBASIC5□□□□□ -1.61
LIMK2P53671 RNA5SP249-201ENST00000516127 99 ntBASIC5□□□□□ -1.61
LIMK2P53671 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 AC011487.3-201ENST00000593607 453 ntBASIC5□□□□□ -1.61
LIMK2P53671 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 AL133406.3-201ENST00000606817 541 ntBASIC5□□□□□ -1.61
LIMK2P53671 AC239803.2-201ENST00000610161 430 ntBASIC5□□□□□ -1.61
LIMK2P53671 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5□□□□□ -1.61
LIMK2P53671 AC091953.3-201ENST00000623220 236 ntBASIC5□□□□□ -1.61
LIMK2P53671 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5□□□□□ -1.61
LIMK2P53671 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5□□□□□ -1.61
LIMK2P53671 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5□□□□□ -1.61
LIMK2P53671 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK2P53671 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK2P53671 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK2P53671 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK2P53671 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 AC087565.3-202ENST00000642085 1603 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK2P53671 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK2P53671 Y_RNA.625-201ENST00000411256 107 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 RPL36AP10-201ENST00000421785 322 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC007064.3-201ENST00000422608 359 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC104837.2-201ENST00000427236 424 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 AL354714.3-201ENST00000447284 493 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 RPS3AP53-201ENST00000454716 778 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 HMGN2P25-201ENST00000486956 268 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK2P53671 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 EDDM3DP-201ENST00000554692 434 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK2P53671 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 CYCSP40-201ENST00000575927 294 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK2P53671 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK2P53671 AC104687.2-201ENST00000604442 342 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 MIR6820-201ENST00000611508 62 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK2P53671 AC015871.5-202ENST00000623252 701 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 AC112694.2-201ENST00000623697 768 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK2P53671 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms