Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 AC003045.1-201ENST00000398779 713 ntBASIC7.41□□□□□ -1.22
RFX1P22670 RPS3AP23-201ENST00000401762 784 ntBASIC7.41□□□□□ -1.22
RFX1P22670 CIR1P3-201ENST00000405137 479 ntBASIC7.41□□□□□ -1.22
RFX1P22670 RNA5SP155-201ENST00000411154 129 ntBASIC7.41□□□□□ -1.22
RFX1P22670 HMGB3P23-201ENST00000414981 585 ntBASIC7.41□□□□□ -1.22
RFX1P22670 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 CCDC58P2-201ENST00000417131 366 ntBASIC7.41□□□□□ -1.22
RFX1P22670 RPL7AP51-201ENST00000422016 760 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AL158073.1-201ENST00000426848 1104 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AC007365.2-201ENST00000428806 458 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 AC002504.1-201ENST00000438281 691 ntBASIC7.41□□□□□ -1.22
RFX1P22670 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.41□□□□□ -1.22
RFX1P22670 TRGVB-201ENST00000453257 471 ntBASIC7.41□□□□□ -1.22
RFX1P22670 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.41□□□□□ -1.22
RFX1P22670 MARK2P8-201ENST00000476069 952 ntBASIC7.41□□□□□ -1.22
RFX1P22670 RN7SL379P-201ENST00000479912 293 ntBASIC7.41□□□□□ -1.22
RFX1P22670 RN7SL382P-201ENST00000482631 282 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AC015524.1-201ENST00000491585 472 ntBASIC7.41□□□□□ -1.22
RFX1P22670 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 MTCYBP17-201ENST00000503579 789 ntBASIC7.41□□□□□ -1.22
RFX1P22670 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.41□□□□□ -1.22
RFX1P22670 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 DPPA3P2-201ENST00000553589 478 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AL121579.1-201ENST00000555129 305 ntBASIC7.41□□□□□ -1.22
RFX1P22670 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 AC122134.1-201ENST00000565664 1104 ntBASIC7.41□□□□□ -1.22
RFX1P22670 UBE2FP2-201ENST00000566646 462 ntBASIC7.41□□□□□ -1.22
RFX1P22670 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.41□□□□□ -1.22
RFX1P22670 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 VN1R79P-201ENST00000593540 513 ntBASIC7.41□□□□□ -1.22
RFX1P22670 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 AC139493.1-201ENST00000604368 397 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AC098614.4-201ENST00000607601 462 ntBASIC7.41□□□□□ -1.22
RFX1P22670 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 AL157786.1-207ENST00000627771 695 ntBASIC7.41□□□□□ -1.22
RFX1P22670 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 CRYM-AS1-204ENST00000637983 556 ntBASIC7.41□□□□□ -1.22
RFX1P22670 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.41□□□□□ -1.22
RFX1P22670 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RFX1P22670 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.4□□□□□ -1.22
RFX1P22670 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX1P22670 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX1P22670 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RFX1P22670 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX1P22670 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 SNRPEP3-201ENST00000338402 276 ntBASIC7.4□□□□□ -1.22
RFX1P22670 Y_RNA.97-201ENST00000363094 102 ntBASIC7.4□□□□□ -1.22
RFX1P22670 RNA5SP232-201ENST00000364144 119 ntBASIC7.4□□□□□ -1.22
RFX1P22670 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 AC092642.1-201ENST00000392417 425 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AL050335.1-201ENST00000396909 869 ntBASIC7.4□□□□□ -1.22
RFX1P22670 Y_RNA.598-201ENST00000410480 95 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC109780.2-201ENST00000413467 845 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 ZYG11AP1-201ENST00000430329 837 ntBASIC7.4□□□□□ -1.22
RFX1P22670 ARMC4P1-201ENST00000438905 707 ntBASIC7.4□□□□□ -1.22
RFX1P22670 TIMM8BP2-201ENST00000445940 251 ntBASIC7.4□□□□□ -1.22
RFX1P22670 MORF4-201ENST00000447135 971 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AL139156.3-201ENST00000454802 394 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms