Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.9□□□□□ -1.46
ATF4P18848 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.9□□□□□ -1.46
ATF4P18848 RPL23AP92-201ENST00000603609 255 ntBASIC5.9□□□□□ -1.46
ATF4P18848 AC126118.1-201ENST00000607744 628 ntBASIC5.9□□□□□ -1.46
ATF4P18848 AC243772.3-202ENST00000609662 1148 ntBASIC5.9□□□□□ -1.46
ATF4P18848 AC243830.3-201ENST00000616810 376 ntBASIC5.9□□□□□ -1.46
ATF4P18848 U4.5-201ENST00000617137 123 ntBASIC5.9□□□□□ -1.46
ATF4P18848 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC5.9□□□□□ -1.46
ATF4P18848 OR5AK4P-201ENST00000635912 903 ntBASIC5.9□□□□□ -1.46
ATF4P18848 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.9□□□□□ -1.46
ATF4P18848 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
ATF4P18848 AC130650.2-201ENST00000618736 2403 ntBASIC5.9□□□□□ -1.47
ATF4P18848 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
ATF4P18848 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.9□□□□□ -1.47
ATF4P18848 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 AC010132.4-201ENST00000569883 1368 ntBASIC5.9□□□□□ -1.47
ATF4P18848 MTND5P26-201ENST00000426018 1752 ntBASIC5.9□□□□□ -1.47
ATF4P18848 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.9□□□□□ -1.47
ATF4P18848 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 AL592148.3-201ENST00000608771 2646 ntBASIC5.9□□□□□ -1.47
ATF4P18848 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.9□□□□□ -1.47
ATF4P18848 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATF4P18848 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 AL080312.1-201ENST00000256654 824 ntBASIC5.89□□□□□ -1.47
ATF4P18848 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
ATF4P18848 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ATF4P18848 RN7SKP76-201ENST00000364419 323 ntBASIC5.89□□□□□ -1.47
ATF4P18848 CST13P-201ENST00000376992 428 ntBASIC5.89□□□□□ -1.47
ATF4P18848 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 RNU6-769P-201ENST00000384407 104 ntBASIC5.89□□□□□ -1.47
ATF4P18848 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ATF4P18848 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 YWHAZP6-201ENST00000399764 738 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RNU6-248P-201ENST00000410720 107 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RN7SKP119-201ENST00000410753 273 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC245060.4-201ENST00000413293 1121 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 RAD23BP1-201ENST00000421404 1227 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RPL12P34-201ENST00000424532 479 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.89□□□□□ -1.47
ATF4P18848 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.89□□□□□ -1.47
ATF4P18848 GAPDHP32-201ENST00000433816 998 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AL031667.1-201ENST00000440222 725 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AL022238.1-201ENST00000442557 355 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 RPL7P36-201ENST00000444633 681 ntBASIC5.89□□□□□ -1.47
ATF4P18848 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC5.89□□□□□ -1.47
ATF4P18848 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 AC099563.1-201ENST00000456086 418 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 RPL12P40-201ENST00000467028 488 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RPL7AP56-201ENST00000476420 791 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AL355076.1-201ENST00000484315 270 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
ATF4P18848 GCSHP1-201ENST00000512554 484 ntBASIC5.89□□□□□ -1.47
ATF4P18848 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 RNU6-506P-201ENST00000516553 94 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC5.89□□□□□ -1.47
ATF4P18848 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.89□□□□□ -1.47
ATF4P18848 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC5.89□□□□□ -1.47
ATF4P18848 AC142086.3-201ENST00000563896 802 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RN7SL802P-201ENST00000577858 299 ntBASIC5.89□□□□□ -1.47
ATF4P18848 RN7SL376P-201ENST00000578594 264 ntBASIC5.89□□□□□ -1.47
ATF4P18848 MIR4682-201ENST00000580643 80 ntBASIC5.89□□□□□ -1.47
ATF4P18848 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 AL359999.1-201ENST00000604513 294 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC090578.1-201ENST00000604955 591 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC123788.2-201ENST00000612290 283 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC245028.3-201ENST00000618197 285 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC073534.2-201ENST00000620377 381 ntBASIC5.89□□□□□ -1.47
ATF4P18848 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 ZNF300P1-201ENST00000356555 1822 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AL122126.1-201ENST00000546905 1318 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms