Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LAMP1P11279 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 RN7SKP125-201ENST00000410481 302 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AC007064.3-201ENST00000422608 359 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AL645608.4-201ENST00000423619 154 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AJ239321.1-201ENST00000424255 564 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 FAM204CP-201ENST00000424489 642 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LAMP1P11279 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.54□□□□□ -1.68
LAMP1P11279 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.54□□□□□ -1.68
LAMP1P11279 ARL4AP4-201ENST00000434170 518 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 RPS26P2-201ENST00000440331 348 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC016724.1-201ENST00000453215 421 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 RN7SL727P-201ENST00000482164 296 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.54□□□□□ -1.68
LAMP1P11279 SUMO2P4-201ENST00000504193 276 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.54□□□□□ -1.68
LAMP1P11279 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.54□□□□□ -1.68
LAMP1P11279 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.54□□□□□ -1.68
LAMP1P11279 AP001521.2-201ENST00000608772 546 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AC007497.1-201ENST00000610421 561 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.54□□□□□ -1.68
LAMP1P11279 AC073869.7-201ENST00000640874 297 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LAMP1P11279 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LAMP1P11279 NAMPTP1-201ENST00000440465 2514 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
LAMP1P11279 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LAMP1P11279 AC097461.1-201ENST00000568928 2821 ntBASIC4.54□□□□□ -1.68
LAMP1P11279 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
LAMP1P11279 BRAFP1-201ENST00000445336 2703 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC021242.1-201ENST00000507315 2035 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 MTCO1P11-201ENST00000429111 1528 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.53□□□□□ -1.68
LAMP1P11279 RNU6-697P-201ENST00000363348 107 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LAMP1P11279 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 AL080315.1-201ENST00000406055 466 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.53□□□□□ -1.68
LAMP1P11279 AL356968.2-201ENST00000412769 1257 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.53□□□□□ -1.68
LAMP1P11279 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 LINC00993-201ENST00000420453 540 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.53□□□□□ -1.68
LAMP1P11279 RPL7P57-201ENST00000423238 740 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC092647.3-201ENST00000443044 633 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 OR52A4P-202ENST00000481634 799 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC109462.1-201ENST00000491087 368 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC117525.1-201ENST00000515228 503 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 RNA5SP34-201ENST00000516887 130 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC013701.1-201ENST00000522657 465 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 MORF4L1P3-201ENST00000525966 950 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC005000.1-201ENST00000536192 288 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.53□□□□□ -1.68
LAMP1P11279 AL390334.1-201ENST00000556395 450 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.53□□□□□ -1.68
LAMP1P11279 AC020910.3-201ENST00000603701 874 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AC009163.6-201ENST00000612367 342 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 EIF3FP1-201ENST00000613970 806 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 AL118508.4-201ENST00000624142 1176 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.53□□□□□ -1.68
LAMP1P11279 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
LAMP1P11279 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LAMP1P11279 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LAMP1P11279 MAPK10-349ENST00000641767 3661 ntBASIC4.53□□□□□ -1.68
LAMP1P11279 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LAMP1P11279 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
LAMP1P11279 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
LAMP1P11279 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LAMP1P11279 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LAMP1P11279 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LAMP1P11279 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.52□□□□□ -1.69
LAMP1P11279 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.52□□□□□ -1.69
LAMP1P11279 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LAMP1P11279 AC083843.2-201ENST00000568248 6253 ntBASIC4.52□□□□□ -1.69
LAMP1P11279 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.52□□□□□ -1.69
LAMP1P11279 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LAMP1P11279 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LAMP1P11279 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.52□□□□□ -1.69
LAMP1P11279 RN7SKP95-201ENST00000362860 303 ntBASIC4.52□□□□□ -1.69
LAMP1P11279 RNU4-4P-201ENST00000364588 130 ntBASIC4.52□□□□□ -1.69
LAMP1P11279 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LAMP1P11279 MIR765-201ENST00000390226 114 ntBASIC4.52□□□□□ -1.69
LAMP1P11279 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.52□□□□□ -1.69
LAMP1P11279 HMGB3P7-201ENST00000400214 611 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms