Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 UBBP2-201ENST00000376781 231 ntBASIC5.08□□□□□ -1.6
APOEP02649 RNU2-22P-201ENST00000411266 212 ntBASIC5.08□□□□□ -1.6
APOEP02649 AC016769.2-201ENST00000414815 475 ntBASIC5.08□□□□□ -1.6
APOEP02649 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.08□□□□□ -1.6
APOEP02649 AC012519.1-201ENST00000424588 610 ntBASIC5.08□□□□□ -1.6
APOEP02649 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.08□□□□□ -1.6
APOEP02649 AL591363.1-201ENST00000450091 483 ntBASIC5.08□□□□□ -1.6
APOEP02649 OR52J1P-201ENST00000450596 932 ntBASIC5.08□□□□□ -1.6
APOEP02649 AC234781.3-201ENST00000452540 973 ntBASIC5.08□□□□□ -1.6
APOEP02649 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.08□□□□□ -1.6
APOEP02649 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 AC231760.1-201ENST00000498002 260 ntBASIC5.08□□□□□ -1.6
APOEP02649 RNA5SP249-201ENST00000516127 99 ntBASIC5.08□□□□□ -1.6
APOEP02649 AC022882.1-201ENST00000532142 501 ntBASIC5.08□□□□□ -1.6
APOEP02649 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.08□□□□□ -1.6
APOEP02649 AP000919.1-201ENST00000582850 985 ntBASIC5.08□□□□□ -1.6
APOEP02649 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.08□□□□□ -1.6
APOEP02649 CR381572.2-201ENST00000624852 397 ntBASIC5.08□□□□□ -1.6
APOEP02649 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
APOEP02649 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 A2MP1-204ENST00000566278 4130 ntBASIC5.08□□□□□ -1.6
APOEP02649 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
APOEP02649 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.08□□□□□ -1.6
APOEP02649 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APOEP02649 SAMMSON-226ENST00000642089 1582 ntBASIC5.08□□□□□ -1.6
APOEP02649 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOEP02649 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOEP02649 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOEP02649 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOEP02649 MTCO1P22-201ENST00000604619 1360 ntBASIC5.07□□□□□ -1.6
APOEP02649 AC008758.3-201ENST00000507003 1829 ntBASIC5.07□□□□□ -1.6
APOEP02649 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOEP02649 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
APOEP02649 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
APOEP02649 RN7SKP103-201ENST00000363848 320 ntBASIC5.07□□□□□ -1.6
APOEP02649 AL357515.1-201ENST00000402967 542 ntBASIC5.07□□□□□ -1.6
APOEP02649 TMBIM7P-201ENST00000418074 855 ntBASIC5.07□□□□□ -1.6
APOEP02649 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.07□□□□□ -1.6
APOEP02649 AC000111.2-201ENST00000448200 210 ntBASIC5.07□□□□□ -1.6
APOEP02649 AC091685.2-201ENST00000454924 864 ntBASIC5.07□□□□□ -1.6
APOEP02649 RN7SL517P-201ENST00000462240 305 ntBASIC5.07□□□□□ -1.6
APOEP02649 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.07□□□□□ -1.6
APOEP02649 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.07□□□□□ -1.6
APOEP02649 RNA5SP360-201ENST00000516555 118 ntBASIC5.07□□□□□ -1.6
APOEP02649 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.07□□□□□ -1.6
APOEP02649 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.07□□□□□ -1.6
APOEP02649 AC233280.2-201ENST00000603917 1070 ntBASIC5.07□□□□□ -1.6
APOEP02649 AL031320.1-201ENST00000604177 357 ntBASIC5.07□□□□□ -1.6
APOEP02649 Mico1.1-201ENST00000611698 204 ntBASIC5.07□□□□□ -1.6
APOEP02649 AP001005.3-201ENST00000622049 129 ntBASIC5.07□□□□□ -1.6
APOEP02649 AP001784.1-201ENST00000624107 428 ntBASIC5.07□□□□□ -1.6
APOEP02649 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
APOEP02649 SCN1A-220ENST00000641603 12506 ntBASIC5.07□□□□□ -1.6
APOEP02649 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
APOEP02649 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.06□□□□□ -1.6
APOEP02649 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
APOEP02649 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
APOEP02649 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
APOEP02649 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
APOEP02649 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
APOEP02649 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
APOEP02649 AL359643.1-201ENST00000404109 423 ntBASIC5.06□□□□□ -1.6
APOEP02649 AC114755.2-201ENST00000413520 361 ntBASIC5.06□□□□□ -1.6
APOEP02649 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
APOEP02649 AL139128.1-201ENST00000413921 941 ntBASIC5.06□□□□□ -1.6
APOEP02649 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.06□□□□□ -1.6
APOEP02649 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.06□□□□□ -1.6
APOEP02649 RPL36AP10-201ENST00000421785 322 ntBASIC5.06□□□□□ -1.6
APOEP02649 AC007559.1-201ENST00000428736 355 ntBASIC5.06□□□□□ -1.6
APOEP02649 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.06□□□□□ -1.6
APOEP02649 AC006466.1-201ENST00000438721 289 ntBASIC5.06□□□□□ -1.6
APOEP02649 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.06□□□□□ -1.6
APOEP02649 OR1H1P-201ENST00000448731 937 ntBASIC5.06□□□□□ -1.6
APOEP02649 RPL35AP28-201ENST00000459730 331 ntBASIC5.06□□□□□ -1.6
APOEP02649 RPL23AP56-201ENST00000460778 453 ntBASIC5.06□□□□□ -1.6
APOEP02649 AC063943.1-201ENST00000465434 453 ntBASIC5.06□□□□□ -1.6
APOEP02649 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.06□□□□□ -1.6
APOEP02649 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
APOEP02649 BTG4P1-201ENST00000510421 183 ntBASIC5.06□□□□□ -1.6
APOEP02649 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.06□□□□□ -1.6
APOEP02649 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.06□□□□□ -1.6
APOEP02649 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.06□□□□□ -1.6
APOEP02649 SNORA74C-1-201ENST00000580726 201 ntBASIC5.06□□□□□ -1.6
APOEP02649 MIR3667-201ENST00000581025 74 ntBASIC5.06□□□□□ -1.6
APOEP02649 AC008536.1-201ENST00000602872 669 ntBASIC5.06□□□□□ -1.6
APOEP02649 AL008729.2-201ENST00000606393 473 ntBASIC5.06□□□□□ -1.6
APOEP02649 AC010424.2-201ENST00000607594 443 ntBASIC5.06□□□□□ -1.6
APOEP02649 FAM25E-202ENST00000608562 189 ntBASIC5.06□□□□□ -1.6
APOEP02649 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
APOEP02649 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
APOEP02649 SDAD1P1-202ENST00000524156 2051 ntBASIC5.06□□□□□ -1.6
APOEP02649 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms