Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USH2AO75445 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USH2AO75445 RNA5SP126-201ENST00000365092 109 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 RN7SKP289-201ENST00000517244 295 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC022360.1-201ENST00000521058 340 ntBASIC2.03□□□□□ -2.08
USH2AO75445 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC2.03□□□□□ -2.08
USH2AO75445 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 AL391262.1-201ENST00000556558 1992 ntBASIC2.03□□□□□ -2.08
USH2AO75445 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.09
USH2AO75445 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC2.03□□□□□ -2.09
USH2AO75445 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC2.03□□□□□ -2.09
USH2AO75445 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
USH2AO75445 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC2.03□□□□□ -2.09
USH2AO75445 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
USH2AO75445 AC011998.1-201ENST00000433403 117 ntBASIC2.03□□□□□ -2.09
USH2AO75445 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC2.03□□□□□ -2.09
USH2AO75445 AC093249.4-201ENST00000564755 259 ntBASIC2.03□□□□□ -2.09
USH2AO75445 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC2.03□□□□□ -2.09
USH2AO75445 AL159169.3-201ENST00000608871 561 ntBASIC2.03□□□□□ -2.09
USH2AO75445 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
USH2AO75445 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 UQCRC2P1-201ENST00000417777 1332 ntBASIC2.02□□□□□ -2.09
USH2AO75445 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 AL512649.1-201ENST00000428997 581 ntBASIC2.02□□□□□ -2.09
USH2AO75445 APOOP2-201ENST00000461561 539 ntBASIC2.02□□□□□ -2.09
USH2AO75445 NPM1P21-201ENST00000513394 762 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AC090912.3-201ENST00000609775 533 ntBASIC2.02□□□□□ -2.09
USH2AO75445 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 MIR7151-201ENST00000617477 60 ntBASIC2.02□□□□□ -2.09
USH2AO75445 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC2.02□□□□□ -2.09
USH2AO75445 UGP2-232ENST00000640075 567 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 AL158163.1-201ENST00000603915 1649 ntBASIC2.02□□□□□ -2.09
USH2AO75445 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 SMG1P6-201ENST00000532337 2930 ntBASIC2.02□□□□□ -2.09
USH2AO75445 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 AC108467.2-201ENST00000617640 1597 ntBASIC2.02□□□□□ -2.09
USH2AO75445 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 U3.26-201ENST00000391236 204 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 RPL7P4-203ENST00000430239 730 ntBASIC2.02□□□□□ -2.09
USH2AO75445 RPS24P16-201ENST00000497294 392 ntBASIC2.02□□□□□ -2.09
USH2AO75445 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.02□□□□□ -2.09
USH2AO75445 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.02□□□□□ -2.09
USH2AO75445 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USH2AO75445 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
USH2AO75445 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.02□□□□□ -2.09
USH2AO75445 MAPK10-349ENST00000641767 3661 ntBASIC2.02□□□□□ -2.09
USH2AO75445 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 U8.11-201ENST00000384699 133 ntBASIC2.02□□□□□ -2.09
USH2AO75445 U8.12-201ENST00000384701 133 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms