Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 KNOP1P3-201ENST00000446933 426 ntBASIC4.7□□□□□ -1.66
HCN1O60741 MRPL35P2-201ENST00000448009 511 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AC092647.2-201ENST00000452998 253 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AL133244.1-201ENST00000456007 258 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AC091180.1-201ENST00000462104 372 ntBASIC4.7□□□□□ -1.66
HCN1O60741 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 AC105031.1-201ENST00000518550 476 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 BNIP3P35-201ENST00000604530 490 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AC023813.4-201ENST00000607580 580 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AC133644.2-201ENST00000608142 540 ntBASIC4.7□□□□□ -1.66
HCN1O60741 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 AP005131.7-201ENST00000610087 611 ntBASIC4.7□□□□□ -1.66
HCN1O60741 EIF3FP1-201ENST00000613970 806 ntBASIC4.7□□□□□ -1.66
HCN1O60741 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCN1O60741 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCN1O60741 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCN1O60741 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 CASC19-221ENST00000641309 1382 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCN1O60741 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.69□□□□□ -1.66
HCN1O60741 RN7SKP247-201ENST00000411094 308 ntBASIC4.69□□□□□ -1.66
HCN1O60741 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HCN1O60741 EI24P4-201ENST00000423683 1078 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.69□□□□□ -1.66
HCN1O60741 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.69□□□□□ -1.66
HCN1O60741 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCN1O60741 AC092447.2-201ENST00000435487 669 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 AL772161.1-201ENST00000439130 476 ntBASIC4.69□□□□□ -1.66
HCN1O60741 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.69□□□□□ -1.66
HCN1O60741 RPL7P61-201ENST00000451721 751 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AC097173.1-201ENST00000505862 819 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.69□□□□□ -1.66
HCN1O60741 RNA5SP464-201ENST00000516251 108 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.69□□□□□ -1.66
HCN1O60741 AP001922.4-201ENST00000526967 290 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 PCNPP1-201ENST00000552501 511 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 AC004948.1-201ENST00000609858 672 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AL049539.1-201ENST00000611964 459 ntBASIC4.69□□□□□ -1.66
HCN1O60741 AC107905.1-201ENST00000616204 426 ntBASIC4.69□□□□□ -1.66
HCN1O60741 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HCN1O60741 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCN1O60741 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HCN1O60741 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
HCN1O60741 NXF4-202ENST00000416098 1465 ntBASIC4.69□□□□□ -1.66
HCN1O60741 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HCN1O60741 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.68□□□□□ -1.66
HCN1O60741 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
HCN1O60741 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCN1O60741 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCN1O60741 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCN1O60741 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
HCN1O60741 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCN1O60741 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCN1O60741 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCN1O60741 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.68□□□□□ -1.66
HCN1O60741 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCN1O60741 AL109941.1-201ENST00000401925 229 ntBASIC4.68□□□□□ -1.66
HCN1O60741 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.68□□□□□ -1.66
HCN1O60741 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCN1O60741 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.68□□□□□ -1.66
HCN1O60741 AC013429.2-201ENST00000418798 781 ntBASIC4.68□□□□□ -1.66
HCN1O60741 COX6CP13-201ENST00000428703 226 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms