Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.94■■□□□ 1.42
TNFRSF11AQ9Y6Q6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFRSF11AQ9Y6Q6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.94■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.94■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC079598.2-202ENST00000546624 1451 ntBASIC23.94■■□□□ 1.42
TNFRSF11AQ9Y6Q6 KRT16P1-201ENST00000399124 1418 ntBASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 Z85996.1-201ENST00000494644 937 ntBASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 KRT8P9-201ENST00000558927 1449 ntBASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC116562.2-201ENST00000507042 360 ntBASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
TNFRSF11AQ9Y6Q6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AP001412.1-201ENST00000608405 714 ntBASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TNFRSF11AQ9Y6Q6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TNFRSF11AQ9Y6Q6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TNFRSF11AQ9Y6Q6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TNFRSF11AQ9Y6Q6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
TNFRSF11AQ9Y6Q6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 RBM17P1-201ENST00000453646 1190 ntBASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 MIR4785-201ENST00000585005 73 ntBASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms