Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI2Q9Y5P3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.73■□□□□ 0.75
RAI2Q9Y5P3 TREX1-205ENST00000625293 1783 ntBASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.72■□□□□ 0.75
RAI2Q9Y5P3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 KRT8P8-201ENST00000434750 1448 ntBASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms