Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 AL031963.3-201ENST00000606441 850 ntBASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA3Q9Y5H0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 KRT8P20-201ENST00000423953 1409 ntBASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 AC026471.1-201ENST00000564629 3026 ntBASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 RBM17P1-201ENST00000453646 1190 ntBASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA3Q9Y5H0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 UNC93B2-201ENST00000285383 730 ntBASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 AC145285.6-201ENST00000604632 637 ntBASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA3Q9Y5H0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms