Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 MFAP1P1-201ENST00000442257 1255 ntBASIC26.71■■□□□ 1.87
NINLQ9Y2I6 SLC25A3P1-201ENST00000443844 931 ntBASIC26.71■■□□□ 1.87
NINLQ9Y2I6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
NINLQ9Y2I6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
NINLQ9Y2I6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
NINLQ9Y2I6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 KRT8P41-201ENST00000533985 1514 ntBASIC26.7■■□□□ 1.86
NINLQ9Y2I6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 AC005363.2-201ENST00000618631 242 ntBASIC26.7■■□□□ 1.86
NINLQ9Y2I6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
NINLQ9Y2I6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NINLQ9Y2I6 AC092667.1-201ENST00000434301 2586 ntBASIC26.68■■□□□ 1.86
NINLQ9Y2I6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 TERF1P1-201ENST00000311003 1181 ntBASIC26.68■■□□□ 1.86
NINLQ9Y2I6 CRYGFP-201ENST00000418459 633 ntBASIC26.68■■□□□ 1.86
NINLQ9Y2I6 TPM4P1-201ENST00000436100 807 ntBASIC26.68■■□□□ 1.86
NINLQ9Y2I6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
NINLQ9Y2I6 AC073508.3-201ENST00000619697 1419 ntBASIC26.67■■□□□ 1.86
NINLQ9Y2I6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.67■■□□□ 1.86
NINLQ9Y2I6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 SLC25A1P4-201ENST00000567977 778 ntBASIC26.66■■□□□ 1.86
NINLQ9Y2I6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
NINLQ9Y2I6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms