Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.67■■□□□ 1.38
DENND2AQ9ULE3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
DENND2AQ9ULE3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 RCC2P6-201ENST00000526625 1557 ntBASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 KRT18P21-201ENST00000515767 1272 ntBASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 AP005242.2-201ENST00000580065 1175 ntBASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.66■■□□□ 1.38
DENND2AQ9ULE3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 AC073130.3-201ENST00000624389 2278 ntBASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 AC010947.1-201ENST00000623454 693 ntBASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DENND2AQ9ULE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.64■■□□□ 1.38
DENND2AQ9ULE3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 RCN1P1-201ENST00000400413 996 ntBASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 AC004951.3-201ENST00000418645 1148 ntBASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 AP000692.2-201ENST00000608391 879 ntBASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 AC011298.2-201ENST00000617989 482 ntBASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 LINC01521-201ENST00000504184 1943 ntBASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 LINC01568-207ENST00000641790 1380 ntBASIC23.64■■□□□ 1.37
DENND2AQ9ULE3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 AC097488.1-201ENST00000507834 756 ntBASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DENND2AQ9ULE3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 AC008040.2-201ENST00000461049 708 ntBASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DENND2AQ9ULE3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
DENND2AQ9ULE3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms