Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 ZNF444P1-201ENST00000559497 298 ntBASIC20.77■□□□□ 0.92
CHD7Q9P2D1 NEK4P2-201ENST00000580004 1012 ntBASIC20.77■□□□□ 0.92
CHD7Q9P2D1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 STARP1-201ENST00000397973 869 ntBASIC20.77■□□□□ 0.92
CHD7Q9P2D1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD7Q9P2D1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 CA15P1-201ENST00000481698 905 ntBASIC20.76■□□□□ 0.91
CHD7Q9P2D1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 MIR3652-201ENST00000579335 131 ntBASIC20.76■□□□□ 0.91
CHD7Q9P2D1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.76■□□□□ 0.91
CHD7Q9P2D1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD7Q9P2D1 TUBB8P6-201ENST00000436895 1288 ntBASIC20.76■□□□□ 0.91
CHD7Q9P2D1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 AL022342.1-201ENST00000400363 863 ntBASIC20.75■□□□□ 0.91
CHD7Q9P2D1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD7Q9P2D1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 AC140113.3-201ENST00000605663 199 ntBASIC20.74■□□□□ 0.91
CHD7Q9P2D1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.74■□□□□ 0.91
CHD7Q9P2D1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 AC139530.3-201ENST00000620344 690 ntBASIC20.74■□□□□ 0.91
CHD7Q9P2D1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 SMG8-203ENST00000578922 2178 ntBASIC20.74■□□□□ 0.91
CHD7Q9P2D1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD7Q9P2D1 AP000593.1-201ENST00000393668 712 ntBASIC20.73■□□□□ 0.91
CHD7Q9P2D1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 AC112907.2-201ENST00000448639 330 ntBASIC20.73■□□□□ 0.91
CHD7Q9P2D1 EMBP1-201ENST00000458200 901 ntBASIC20.73■□□□□ 0.91
CHD7Q9P2D1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 HBZP1-201ENST00000354915 429 ntBASIC20.73■□□□□ 0.91
CHD7Q9P2D1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD7Q9P2D1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 LINC01311-201ENST00000565162 1445 ntBASIC20.72■□□□□ 0.91
CHD7Q9P2D1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD7Q9P2D1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms