Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.07■□□□□ 0.48
HPF1Q9NWY4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 AC073195.1-201ENST00000607241 877 ntBASIC18.07■□□□□ 0.48
HPF1Q9NWY4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 AP001271.2-201ENST00000624018 1556 ntBASIC18.07■□□□□ 0.48
HPF1Q9NWY4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPF1Q9NWY4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.06■□□□□ 0.48
HPF1Q9NWY4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.06■□□□□ 0.48
HPF1Q9NWY4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPF1Q9NWY4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 CD177P1-201ENST00000606252 935 ntBASIC18.05■□□□□ 0.48
HPF1Q9NWY4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPF1Q9NWY4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 AL162377.1-201ENST00000618844 1793 ntBASIC18.04■□□□□ 0.48
HPF1Q9NWY4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms