Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCM2LQ9NUG4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCM2LQ9NUG4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCM2LQ9NUG4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCM2LQ9NUG4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 KRT18P29-201ENST00000397031 1267 ntBASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 UBE2DNL-204ENST00000602536 740 ntBASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.52■□□□□ 0.56
CCM2LQ9NUG4 AC009113.1-201ENST00000570267 2443 ntBASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 PTBP1P-201ENST00000554374 1601 ntBASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCM2LQ9NUG4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 RBM17P2-201ENST00000616397 1405 ntBASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 AC104581.1-202ENST00000635932 2618 ntBASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 AF201337.1-201ENST00000520239 748 ntBASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 AL356652.1-201ENST00000615962 565 ntBASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCM2LQ9NUG4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 PGM5P4-201ENST00000421970 445 ntBASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCM2LQ9NUG4 ITM2C-210ENST00000620962 501 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms