Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 GCSHP5-201ENST00000443090 522 ntBASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
SDHAF3Q9NRP4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SDHAF3Q9NRP4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 PCDHAC2-203ENST00000615316 3011 ntBASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.89■□□□□ 0.45
SDHAF3Q9NRP4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 AP006294.2-201ENST00000641667 209 ntBASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 KRT8P8-201ENST00000434750 1448 ntBASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.88■□□□□ 0.45
SDHAF3Q9NRP4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms