Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRDM9Q9NQV7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 AC066615.1-201ENST00000640911 628 ntBASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRDM9Q9NQV7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRDM9Q9NQV7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 KRT8P8-201ENST00000434750 1448 ntBASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 RARRES2P10-201ENST00000564312 460 ntBASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRDM9Q9NQV7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 AL135905.2-201ENST00000584934 1404 ntBASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 AC008550.1-201ENST00000511500 884 ntBASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRDM9Q9NQV7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms