Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MKKSQ9NPJ1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 AL391422.3-201ENST00000603791 2761 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 AL691432.2-201ENST00000607222 2038 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 NIFKP9-201ENST00000419265 221 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 TSPY7P-201ENST00000431358 1114 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 KSR1P1-201ENST00000446298 240 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 CD177P1-201ENST00000606252 935 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 TMEM179-206ENST00000616017 1645 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 AC009237.14-201ENST00000609975 1594 ntBASIC18.47■□□□□ 0.55
MKKSQ9NPJ1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 AC099778.1-201ENST00000568593 1911 ntBASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
MKKSQ9NPJ1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MKKSQ9NPJ1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MKKSQ9NPJ1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MKKSQ9NPJ1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms