Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.37■□□□□ 0.69
SSU72Q9NP77 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 CYP2T3P-201ENST00000601990 817 ntBASIC19.36■□□□□ 0.69
SSU72Q9NP77 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 AL354751.1-201ENST00000412768 1863 ntBASIC19.36■□□□□ 0.69
SSU72Q9NP77 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.36■□□□□ 0.69
SSU72Q9NP77 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSU72Q9NP77 FP475955.4-201ENST00000623131 1990 ntBASIC19.35■□□□□ 0.69
SSU72Q9NP77 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.35■□□□□ 0.69
SSU72Q9NP77 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.35■□□□□ 0.69
SSU72Q9NP77 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SSU72Q9NP77 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.35■□□□□ 0.69
SSU72Q9NP77 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.35■□□□□ 0.69
SSU72Q9NP77 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSU72Q9NP77 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SSU72Q9NP77 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 AL512353.2-201ENST00000448759 1962 ntBASIC19.34■□□□□ 0.69
SSU72Q9NP77 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.34■□□□□ 0.69
SSU72Q9NP77 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SSU72Q9NP77 AC005837.3-201ENST00000612163 286 ntBASIC19.34■□□□□ 0.69
SSU72Q9NP77 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.34■□□□□ 0.69
SSU72Q9NP77 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSU72Q9NP77 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
SSU72Q9NP77 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.33■□□□□ 0.69
SSU72Q9NP77 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.33■□□□□ 0.69
SSU72Q9NP77 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSU72Q9NP77 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSU72Q9NP77 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSU72Q9NP77 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSU72Q9NP77 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSU72Q9NP77 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.33■□□□□ 0.69
SSU72Q9NP77 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SSU72Q9NP77 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SSU72Q9NP77 C2orf69P4-201ENST00000565394 541 ntBASIC19.33■□□□□ 0.68
SSU72Q9NP77 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SSU72Q9NP77 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSU72Q9NP77 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.33■□□□□ 0.68
SSU72Q9NP77 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.33■□□□□ 0.68
SSU72Q9NP77 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms