Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 NBPF21P-201ENST00000425093 1451 ntBASIC16.66■□□□□ 0.26
GCM1Q9NP62 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 AP006587.1-201ENST00000534129 1502 ntBASIC16.65■□□□□ 0.26
GCM1Q9NP62 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 AC110285.5-201ENST00000611501 352 ntBASIC16.65■□□□□ 0.26
GCM1Q9NP62 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
GCM1Q9NP62 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GCM1Q9NP62 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GCM1Q9NP62 AC009237.14-201ENST00000609975 1594 ntBASIC16.64■□□□□ 0.25
GCM1Q9NP62 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GCM1Q9NP62 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
GCM1Q9NP62 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
GCM1Q9NP62 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.63■□□□□ 0.25
GCM1Q9NP62 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GCM1Q9NP62 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.63■□□□□ 0.25
GCM1Q9NP62 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GCM1Q9NP62 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.63■□□□□ 0.25
GCM1Q9NP62 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.63■□□□□ 0.25
GCM1Q9NP62 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms