Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TSPY21P-201ENST00000433481 731 ntBASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 TSPY23P-201ENST00000440136 739 ntBASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFYVE28Q9HCC9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 GCSHP2-201ENST00000560971 527 ntBASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 MIR3652-201ENST00000579335 131 ntBASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 RN7SL510P-201ENST00000581311 263 ntBASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFYVE28Q9HCC9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 PRELID1P1-202ENST00000567272 903 ntBASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 NPAP1P7-201ENST00000613027 823 ntBASIC22.33■■□□□ 1.17
ZFYVE28Q9HCC9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZFYVE28Q9HCC9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZFYVE28Q9HCC9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 FDX1P1-201ENST00000449115 551 ntBASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 AC092119.3-201ENST00000612618 583 ntBASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZFYVE28Q9HCC9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZFYVE28Q9HCC9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 AC004870.1-201ENST00000315132 882 ntBASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms