Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 ZNF815P-204ENST00000434898 1737 ntBASIC18.8■□□□□ 0.6
TUBB1Q9H4B7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 NEFHP1-201ENST00000412845 2629 ntBASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 MIPEPP3-201ENST00000412105 444 ntBASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 AL138781.2-201ENST00000617896 1843 ntBASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBB1Q9H4B7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 DUSP5P2-201ENST00000426873 1033 ntBASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 AC006557.6-201ENST00000623071 864 ntBASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBB1Q9H4B7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 AC006333.2-201ENST00000607957 2099 ntBASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 AL390719.1-204ENST00000412397 1219 ntBASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBB1Q9H4B7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TUBB1Q9H4B7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBB1Q9H4B7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms