Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 AC106730.1-201ENST00000566722 1090 ntBASIC18.69■□□□□ 0.58
SPTBN4Q9H254 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 LINC00265-3P-201ENST00000447588 903 ntBASIC18.68■□□□□ 0.58
SPTBN4Q9H254 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 AC009065.1-201ENST00000564055 1225 ntBASIC18.68■□□□□ 0.58
SPTBN4Q9H254 AC074051.2-201ENST00000565115 352 ntBASIC18.68■□□□□ 0.58
SPTBN4Q9H254 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN4Q9H254 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 AC104819.1-201ENST00000504587 486 ntBASIC18.67■□□□□ 0.58
SPTBN4Q9H254 KRT8P26-201ENST00000534154 1276 ntBASIC18.67■□□□□ 0.58
SPTBN4Q9H254 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 KRT16P6-202ENST00000425692 1426 ntBASIC18.67■□□□□ 0.58
SPTBN4Q9H254 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN4Q9H254 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 HLA-A-209ENST00000638375 975 ntBASIC18.66■□□□□ 0.58
SPTBN4Q9H254 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.66■□□□□ 0.58
SPTBN4Q9H254 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 AC083906.6-201ENST00000641366 219 ntBASIC18.65■□□□□ 0.58
SPTBN4Q9H254 AC079781.4-201ENST00000641908 219 ntBASIC18.65■□□□□ 0.58
SPTBN4Q9H254 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPTBN4Q9H254 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms