Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 DUSP5P1-201ENST00000441325 1139 ntBASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 PRSS44-201ENST00000515154 1146 ntBASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RTFDC1Q9BY42 SMG8-203ENST00000578922 2178 ntBASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 CKBP1-201ENST00000565489 1086 ntBASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 AL023973.1-201ENST00000624619 620 ntBASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 AC005332.1-201ENST00000577698 1310 ntBASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTFDC1Q9BY42 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 AL359075.1-203ENST00000462729 1002 ntBASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTFDC1Q9BY42 KRT8P41-201ENST00000533985 1514 ntBASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 KRT18P38-201ENST00000449496 1282 ntBASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 AP003041.3-201ENST00000527151 707 ntBASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 AC140113.3-201ENST00000605663 199 ntBASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 BX119927.1-201ENST00000636596 1552 ntBASIC23.74■■□□□ 1.39
RTFDC1Q9BY42 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms