Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 AL160286.2-201ENST00000567150 934 ntBASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AC009947.2-201ENST00000444014 672 ntBASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AC011558.1-201ENST00000623459 338 ntBASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM2D3Q9BRN9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 RNF165-205ENST00000588679 2904 ntBASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 AP001271.2-201ENST00000624018 1556 ntBASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.05□□□□□ -0.16
TM2D3Q9BRN9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 PCED1CP-201ENST00000419887 785 ntBASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 KRT18P56-201ENST00000507275 550 ntBASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 FAM86EP-206ENST00000510506 987 ntBASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.04□□□□□ -0.16
TM2D3Q9BRN9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms