Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHOX2BQ99453 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHOX2BQ99453 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHOX2BQ99453 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHOX2BQ99453 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 AC079781.3-201ENST00000449110 356 ntBASIC19.72■□□□□ 0.75
PHOX2BQ99453 AC023632.3-201ENST00000521633 145 ntBASIC19.72■□□□□ 0.75
PHOX2BQ99453 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 IFNL4P1-201ENST00000607083 540 ntBASIC19.72■□□□□ 0.75
PHOX2BQ99453 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.72■□□□□ 0.75
PHOX2BQ99453 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHOX2BQ99453 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 AC004980.1-204ENST00000429707 299 ntBASIC19.71■□□□□ 0.75
PHOX2BQ99453 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 AC010653.2-201ENST00000623505 997 ntBASIC19.71■□□□□ 0.75
PHOX2BQ99453 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PHOX2BQ99453 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHOX2BQ99453 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 AL160237.2-201ENST00000556165 472 ntBASIC19.7■□□□□ 0.74
PHOX2BQ99453 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHOX2BQ99453 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PHOX2BQ99453 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 AP000692.2-201ENST00000608391 879 ntBASIC19.69■□□□□ 0.74
PHOX2BQ99453 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms