Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 AC008687.6-201ENST00000596318 630 ntBASIC18.48■□□□□ 0.55
BBS4Q96RK4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BBS4Q96RK4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
BBS4Q96RK4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BBS4Q96RK4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.47■□□□□ 0.55
BBS4Q96RK4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.47■□□□□ 0.55
BBS4Q96RK4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BBS4Q96RK4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.47■□□□□ 0.55
BBS4Q96RK4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BBS4Q96RK4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BBS4Q96RK4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
BBS4Q96RK4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.46■□□□□ 0.54
BBS4Q96RK4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
BBS4Q96RK4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
BBS4Q96RK4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 UNC93B4-201ENST00000505679 747 ntBASIC18.45■□□□□ 0.54
BBS4Q96RK4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
BBS4Q96RK4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BBS4Q96RK4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.44■□□□□ 0.54
BBS4Q96RK4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 AP006587.1-201ENST00000534129 1502 ntBASIC18.44■□□□□ 0.54
BBS4Q96RK4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 AC093484.2-201ENST00000580996 2166 ntBASIC18.44■□□□□ 0.54
BBS4Q96RK4 AC007952.6-201ENST00000573168 2673 ntBASIC18.44■□□□□ 0.54
BBS4Q96RK4 AC003957.1-201ENST00000625108 2673 ntBASIC18.44■□□□□ 0.54
BBS4Q96RK4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.44■□□□□ 0.54
BBS4Q96RK4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
BBS4Q96RK4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BBS4Q96RK4 RNA5SP413-201ENST00000516373 109 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms