Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.67■□□□□ 0.26
CITED4Q96RK1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CITED4Q96RK1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CITED4Q96RK1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 AC006455.2-201ENST00000429931 906 ntBASIC16.66■□□□□ 0.26
CITED4Q96RK1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 SYT6-210ENST00000641643 1587 ntBASIC16.66■□□□□ 0.26
CITED4Q96RK1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CITED4Q96RK1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CITED4Q96RK1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 SERBP1P1-201ENST00000396021 1160 ntBASIC16.65■□□□□ 0.26
CITED4Q96RK1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 PCDHA12-202ENST00000613593 2588 ntBASIC16.65■□□□□ 0.26
CITED4Q96RK1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CITED4Q96RK1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CITED4Q96RK1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CITED4Q96RK1 LINC01465-201ENST00000408887 1940 ntBASIC16.64■□□□□ 0.26
CITED4Q96RK1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 AL162430.1-201ENST00000480705 870 ntBASIC16.64■□□□□ 0.25
CITED4Q96RK1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.64■□□□□ 0.25
CITED4Q96RK1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.64■□□□□ 0.25
CITED4Q96RK1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CITED4Q96RK1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms