Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 MIR1238-201ENST00000408483 83 ntBASIC18.79■□□□□ 0.6
RNF31Q96EP0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
RNF31Q96EP0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.79■□□□□ 0.6
RNF31Q96EP0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF31Q96EP0 REXO1L10P-201ENST00000615707 1290 ntBASIC18.79■□□□□ 0.6
RNF31Q96EP0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF31Q96EP0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RNF31Q96EP0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF31Q96EP0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF31Q96EP0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF31Q96EP0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 RBM17P1-201ENST00000453646 1190 ntBASIC18.78■□□□□ 0.6
RNF31Q96EP0 AC073195.1-201ENST00000607241 877 ntBASIC18.78■□□□□ 0.6
RNF31Q96EP0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.78■□□□□ 0.6
RNF31Q96EP0 MIR6786-201ENST00000616843 113 ntBASIC18.78■□□□□ 0.6
RNF31Q96EP0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF31Q96EP0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF31Q96EP0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF31Q96EP0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF31Q96EP0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 RCN1P1-201ENST00000400413 996 ntBASIC18.77■□□□□ 0.6
RNF31Q96EP0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 PCDHAC2-203ENST00000615316 3011 ntBASIC18.77■□□□□ 0.6
RNF31Q96EP0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF31Q96EP0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RNF31Q96EP0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF31Q96EP0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF31Q96EP0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 AC018553.1-201ENST00000616682 1458 ntBASIC18.76■□□□□ 0.59
RNF31Q96EP0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF31Q96EP0 AC073314.1-201ENST00000568729 2216 ntBASIC18.76■□□□□ 0.59
RNF31Q96EP0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF31Q96EP0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF31Q96EP0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF31Q96EP0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF31Q96EP0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms