Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC1Q92922 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC1Q92922 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC1Q92922 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC1Q92922 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC1Q92922 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.01■■□□□ 1.59
SMARCC1Q92922 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25■■□□□ 1.59
SMARCC1Q92922 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25■■□□□ 1.59
SMARCC1Q92922 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SMARCC1Q92922 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25■■□□□ 1.59
SMARCC1Q92922 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25■■□□□ 1.59
SMARCC1Q92922 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25■■□□□ 1.59
SMARCC1Q92922 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25■■□□□ 1.59
SMARCC1Q92922 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC25■■□□□ 1.59
SMARCC1Q92922 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
SMARCC1Q92922 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SMARCC1Q92922 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC25■■□□□ 1.59
SMARCC1Q92922 KRT8P41-201ENST00000533985 1514 ntBASIC25■■□□□ 1.59
SMARCC1Q92922 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SMARCC1Q92922 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SMARCC1Q92922 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25■■□□□ 1.59
SMARCC1Q92922 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC1Q92922 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC1Q92922 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC1Q92922 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC1Q92922 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC1Q92922 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 AF106564.1-201ENST00000607058 2553 ntBASIC24.99■■□□□ 1.59
SMARCC1Q92922 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.99■■□□□ 1.59
SMARCC1Q92922 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 AP001271.2-201ENST00000624018 1556 ntBASIC24.98■■□□□ 1.59
SMARCC1Q92922 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 AC112907.2-201ENST00000448639 330 ntBASIC24.98■■□□□ 1.59
SMARCC1Q92922 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 ZNF444P1-201ENST00000559497 298 ntBASIC24.98■■□□□ 1.59
SMARCC1Q92922 NEK4P2-201ENST00000580004 1012 ntBASIC24.98■■□□□ 1.59
SMARCC1Q92922 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC1Q92922 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
SMARCC1Q92922 BX119927.1-201ENST00000636596 1552 ntBASIC24.97■■□□□ 1.59
SMARCC1Q92922 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SMARCC1Q92922 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.97■■□□□ 1.59
SMARCC1Q92922 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.97■■□□□ 1.59
SMARCC1Q92922 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.97■■□□□ 1.59
SMARCC1Q92922 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.97■■□□□ 1.59
SMARCC1Q92922 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.97■■□□□ 1.59
SMARCC1Q92922 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.97■■□□□ 1.59
SMARCC1Q92922 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 SMG8-203ENST00000578922 2178 ntBASIC24.97■■□□□ 1.59
SMARCC1Q92922 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC1Q92922 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.96■■□□□ 1.59
SMARCC1Q92922 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMARCC1Q92922 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms