Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PRORSD1P-201ENST00000295112 541 ntBASIC21■□□□□ 0.95
SEMA4DQ92854 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21■□□□□ 0.95
SEMA4DQ92854 AC239809.2-201ENST00000415381 517 ntBASIC21■□□□□ 0.95
SEMA4DQ92854 TUBB8P6-201ENST00000436895 1288 ntBASIC21■□□□□ 0.95
SEMA4DQ92854 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21■□□□□ 0.95
SEMA4DQ92854 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21■□□□□ 0.95
SEMA4DQ92854 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21■□□□□ 0.95
SEMA4DQ92854 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21■□□□□ 0.95
SEMA4DQ92854 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21■□□□□ 0.95
SEMA4DQ92854 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 AC005332.7-201ENST00000614046 2005 ntBASIC21■□□□□ 0.95
SEMA4DQ92854 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SEMA4DQ92854 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SEMA4DQ92854 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA4DQ92854 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 ABHD17AP1-201ENST00000358206 933 ntBASIC20.99■□□□□ 0.95
SEMA4DQ92854 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
SEMA4DQ92854 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA4DQ92854 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA4DQ92854 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA4DQ92854 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
SEMA4DQ92854 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA4DQ92854 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA4DQ92854 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 C1QBPP2-201ENST00000528754 825 ntBASIC20.98■□□□□ 0.95
SEMA4DQ92854 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SEMA4DQ92854 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA4DQ92854 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.97■□□□□ 0.95
SEMA4DQ92854 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEMA4DQ92854 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 KRT18P29-201ENST00000397031 1267 ntBASIC20.96■□□□□ 0.95
SEMA4DQ92854 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 RPPH1-201ENST00000516869 333 ntBASIC20.96■□□□□ 0.95
SEMA4DQ92854 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms