Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 GPX1P1-201ENST00000388829 606 ntBASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A1Q8WWI5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 ZNF815P-204ENST00000434898 1737 ntBASIC19.54■□□□□ 0.72
SLC44A1Q8WWI5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A1Q8WWI5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A1Q8WWI5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC44A1Q8WWI5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms