Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 SLC25A3P1-201ENST00000443844 931 ntBASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 FAM207BP-201ENST00000447172 505 ntBASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 AC092865.7-201ENST00000641832 219 ntBASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SH3RF3Q8TEJ3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ECEL1P2-202ENST00000465689 757 ntBASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 C2orf69P3-201ENST00000565542 1120 ntBASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SH3RF3Q8TEJ3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 TSPY14P-201ENST00000303979 915 ntBASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 TERF1P1-201ENST00000311003 1181 ntBASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 MFAP1P1-201ENST00000442257 1255 ntBASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3RF3Q8TEJ3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 EGLN1P1-201ENST00000531623 762 ntBASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SH3RF3Q8TEJ3 AC073508.3-201ENST00000619697 1419 ntBASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 AC096733.2-201ENST00000609937 1394 ntBASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 AC010203.1-204ENST00000548782 407 ntBASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3RF3Q8TEJ3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 KRT8P41-201ENST00000533985 1514 ntBASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms