Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LNX1Q8TBB1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.27■■□□□ 1
LNX1Q8TBB1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.27■■□□□ 1
LNX1Q8TBB1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.27■■□□□ 1
LNX1Q8TBB1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.27■□□□□ 0.99
LNX1Q8TBB1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 AF186192.3-201ENST00000583427 947 ntBASIC21.26■□□□□ 0.99
LNX1Q8TBB1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 KRT8P20-201ENST00000423953 1409 ntBASIC21.26■□□□□ 0.99
LNX1Q8TBB1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.26■□□□□ 0.99
LNX1Q8TBB1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNX1Q8TBB1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 AL355075.4-201ENST00000554988 638 ntBASIC21.25■□□□□ 0.99
LNX1Q8TBB1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNX1Q8TBB1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 AC009237.14-201ENST00000609975 1594 ntBASIC21.24■□□□□ 0.99
LNX1Q8TBB1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LNX1Q8TBB1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.23■□□□□ 0.99
LNX1Q8TBB1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.23■□□□□ 0.99
LNX1Q8TBB1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LNX1Q8TBB1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LNX1Q8TBB1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.22■□□□□ 0.99
LNX1Q8TBB1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LNX1Q8TBB1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms