Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 DUX4L11-201ENST00000611504 1267 ntBASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 AC011551.1-201ENST00000614101 683 ntBASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 DUX4L12-201ENST00000614593 1267 ntBASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 DUX4L14-201ENST00000621227 1267 ntBASIC10.71□□□□□ -0.69
SPTSSBQ8NFR3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
SPTSSBQ8NFR3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SPTSSBQ8NFR3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
SPTSSBQ8NFR3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
SPTSSBQ8NFR3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
SPTSSBQ8NFR3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SPTSSBQ8NFR3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 AP005212.1-201ENST00000581547 1997 ntBASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 HYMAI-201ENST00000635591 3347 ntBASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 LINC01126-201ENST00000623515 1646 ntBASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 AC079598.2-202ENST00000546624 1451 ntBASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 CA15P2-201ENST00000611168 834 ntBASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 LINC01529-204ENST00000636474 1715 ntBASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SPTSSBQ8NFR3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms