Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 AC092647.4-201ENST00000457211 535 ntBASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZNF248Q8NDW4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 AC091390.4-202ENST00000476426 537 ntBASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 AC131212.4-201ENST00000623606 975 ntBASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 AP006587.1-201ENST00000534129 1502 ntBASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF248Q8NDW4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 FAM207BP-201ENST00000447172 505 ntBASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 AC139887.4-201ENST00000607877 719 ntBASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF248Q8NDW4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 AC011506.1-201ENST00000474329 610 ntBASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.6■□□□□ 0.57
ZNF248Q8NDW4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms