Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 TMEM179-206ENST00000616017 1645 ntBASIC21.22■□□□□ 0.99
RNF169Q8NCN4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 ARMC10P1-201ENST00000313754 855 ntBASIC21.22■□□□□ 0.99
RNF169Q8NCN4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 SLC25A3P1-201ENST00000443844 931 ntBASIC21.22■□□□□ 0.99
RNF169Q8NCN4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 KRT18P35-201ENST00000510488 1269 ntBASIC21.22■□□□□ 0.99
RNF169Q8NCN4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 C2orf69P3-201ENST00000565542 1120 ntBASIC21.22■□□□□ 0.99
RNF169Q8NCN4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 HLA-A-209ENST00000638375 975 ntBASIC21.22■□□□□ 0.99
RNF169Q8NCN4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF169Q8NCN4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 TERF1P1-201ENST00000311003 1181 ntBASIC21.21■□□□□ 0.99
RNF169Q8NCN4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 AC011298.2-201ENST00000617989 482 ntBASIC21.21■□□□□ 0.99
RNF169Q8NCN4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 AC073314.1-201ENST00000568729 2216 ntBASIC21.21■□□□□ 0.99
RNF169Q8NCN4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF169Q8NCN4 AL391422.3-201ENST00000603791 2761 ntBASIC21.2■□□□□ 0.98
RNF169Q8NCN4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 DGCR10-201ENST00000609839 495 ntBASIC21.2■□□□□ 0.98
RNF169Q8NCN4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF169Q8NCN4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 AL157384.1-201ENST00000445995 2473 ntBASIC21.19■□□□□ 0.98
RNF169Q8NCN4 RCC2P6-201ENST00000526625 1557 ntBASIC21.19■□□□□ 0.98
RNF169Q8NCN4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 ECEL1P2-202ENST00000465689 757 ntBASIC21.19■□□□□ 0.98
RNF169Q8NCN4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF169Q8NCN4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF169Q8NCN4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms