Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 AC098934.4-201ENST00000564127 592 ntBASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 AL121906.2-201ENST00000621597 723 ntBASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 AC124283.5-201ENST00000624661 1809 ntBASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.85■□□□□ 0.45
LSMEM1Q8N8F7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 AL032819.2-201ENST00000624543 2162 ntBASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 AC090192.1-201ENST00000517740 490 ntBASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 AC120498.8-201ENST00000614275 531 ntBASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 AC018445.3-201ENST00000624177 1945 ntBASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSMEM1Q8N8F7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 LTB4R2-202ENST00000528054 3092 ntBASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSMEM1Q8N8F7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 AC005082.1-201ENST00000413042 2259 ntBASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
LSMEM1Q8N8F7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms