Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL390955.1-201ENST00000428694 934 ntBASIC30.6■■■□□ 2.49
VPS8Q8N3P4 AC008040.2-201ENST00000461049 708 ntBASIC30.6■■■□□ 2.49
VPS8Q8N3P4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 AC012306.2-201ENST00000609350 630 ntBASIC30.6■■■□□ 2.49
VPS8Q8N3P4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 AC104417.2-201ENST00000562989 1793 ntBASIC30.59■■■□□ 2.49
VPS8Q8N3P4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
VPS8Q8N3P4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
VPS8Q8N3P4 ANKRD18DP-204ENST00000455355 1975 ntBASIC30.59■■■□□ 2.49
VPS8Q8N3P4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
VPS8Q8N3P4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
VPS8Q8N3P4 ZNF815P-204ENST00000434898 1737 ntBASIC30.59■■■□□ 2.49
VPS8Q8N3P4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
VPS8Q8N3P4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 AP005242.2-201ENST00000580065 1175 ntBASIC30.58■■■□□ 2.49
VPS8Q8N3P4 AC096733.2-201ENST00000609937 1394 ntBASIC30.58■■■□□ 2.49
VPS8Q8N3P4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC30.58■■■□□ 2.49
VPS8Q8N3P4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 FITM1-202ENST00000559294 800 ntBASIC30.57■■■□□ 2.48
VPS8Q8N3P4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VPS8Q8N3P4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 AC091390.4-202ENST00000476426 537 ntBASIC30.56■■■□□ 2.48
VPS8Q8N3P4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 AC011298.2-201ENST00000617989 482 ntBASIC30.56■■■□□ 2.48
VPS8Q8N3P4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 AC004951.3-201ENST00000418645 1148 ntBASIC30.56■■■□□ 2.48
VPS8Q8N3P4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
VPS8Q8N3P4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.55■■■□□ 2.48
VPS8Q8N3P4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 AC073130.3-201ENST00000624389 2278 ntBASIC30.54■■■□□ 2.48
VPS8Q8N3P4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
VPS8Q8N3P4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC30.53■■■□□ 2.48
VPS8Q8N3P4 PWWP2AP1-201ENST00000429776 2273 ntBASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms