Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 AC127496.7-201ENST00000625110 1798 ntBASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
LTBP4Q8N2S1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 AF238378.1-201ENST00000526806 358 ntBASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC27.3■■□□□ 1.96
LTBP4Q8N2S1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
LTBP4Q8N2S1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 TSPY22P-201ENST00000427496 604 ntBASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 AC104819.1-201ENST00000504587 486 ntBASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 MIR7706-201ENST00000613747 67 ntBASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTBP4Q8N2S1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC27.27■■□□□ 1.96
LTBP4Q8N2S1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
LTBP4Q8N2S1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LTBP4Q8N2S1 AC098831.1-202ENST00000438821 336 ntBASIC27.26■■□□□ 1.95
LTBP4Q8N2S1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC27.26■■□□□ 1.95
LTBP4Q8N2S1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC27.26■■□□□ 1.95
LTBP4Q8N2S1 AC064862.7-201ENST00000604520 867 ntBASIC27.26■■□□□ 1.95
LTBP4Q8N2S1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
LTBP4Q8N2S1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTBP4Q8N2S1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LTBP4Q8N2S1 AC074051.2-201ENST00000565115 352 ntBASIC27.25■■□□□ 1.95
LTBP4Q8N2S1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 AL031284.1-201ENST00000419297 478 ntBASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 HLA-F-220ENST00000434407 884 ntBASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
LTBP4Q8N2S1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
LTBP4Q8N2S1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms