Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE9Q8IYJ1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 UNC93B4-201ENST00000505679 747 ntBASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 RNA5SP413-201ENST00000516373 109 ntBASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 UNC93B5-201ENST00000530315 699 ntBASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE9Q8IYJ1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE9Q8IYJ1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 AC005332.7-201ENST00000614046 2005 ntBASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE9Q8IYJ1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 Z82202.1-201ENST00000623446 1880 ntBASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CPNE9Q8IYJ1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE9Q8IYJ1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms